Curated taxonomy IDs

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Curated taxon names were translated back to taxonomy IDs. Note: The numeric suffixes indicating polyphyly are gone, and the IDs precisely match original NCBI taxonomy IDs.

  • ranks.tsv: Curated taxonomic assignments by rank.
  • taxid.map: Mapping of genome IDs to taxonomy IDs.
  • nodes.dmp: Shrinked NCBI nodes file containing relevant taxonomy IDs.
  • names.dmp: Shrinked NCBI names file containing relevant taxonomy IDs.

See also noidx, which hosts original taxon names instead of IDs.