Taxonomy

The original NCBI taxonomy of the sampled genomes.

• taxid.map: Genome ID to NCBI taxonomy ID map.
• ranks.tsv: NCBI taxonomy names at ranks.
• ranks.tid.tsv: NCBI taxonomy IDs at ranks.
• lineages.txt: Greengenes-style lineage strings.
• taxdump: NCBI taxonomy database.
• taxonomy.qza: Pre-compiled QIIME 2 reference taxonomy.
• stats.tsv: Properties and metrics of taxonomic units.

And:

• curation: Tip and node taxonomy curated using tax2tree.